CSB 2010 Refereeing

CSB 2010 - Stanford University, Palo Alto, CA. August 16-18, 2010.

Note on Refereeing Ethics: The articles below are confidential. Please keep them and any discussions about them within the lab. Avoid discussing the results with anyone outside the lab and leveraging your own research based on their reported findings.

Reviews are due on Friday, 4/23.

If you need guidance for filling out a review, feel free to use the ISMB review form. Please have your review completed and sent to Josh by Wednesday 5pm, 4/21 so we can discuss at lab meeting.

For an example of what these look like, you can check out the reviews from ISMB2010 or ISMB 2009.

Papers:

• Submission 008 [191K doc]: Shi and Walker "A Bayesian method to assess the validity of the predicted metabolic pathways."
• Submission 015 [260K pdf]: Ruths and Nakhleh "Generating executable models from signaling network connectivity and semi-quantitative proteomic measurements."
• Submission 019 [117K pdf]: Libbrecht and Dudley. "Using GO ontology to improve Connectivity Map connections."
• Submission 030 [277K pdf]: Shi, Hasan, et al. "Linear coherent bi-cluster discovery via beam detection and sample set clustering."
• Submission 035 [339K pdf]: Liu et al. "ESTROGEN-MEDIATED GENE REGULATION IN PATIENTS WITH CHRONIC MYELOID LEUKEMIA."
• Submission 036 [290K pdf]: Bandyopadhyay et al. "Modeling Perturbations using Gene Networks."
• Submission 052 [572K pdf]: Liu, Niculescu-mizil et al. "Temporal Graphical Models for Cross-Species Gene Regulatory Network Discovery."
• Submission 076 [312K pdf]: Gong et al. "Analysis and Model Checking of the HMGB1 Signaling Pathway."