Biblio

Found 6 results

Filters: Author is Carlin, Daniel E [Clear All Filters]

2017

D. E. Carlin, Paull, E. O., Graim, K., Wong, C. K., Bivol, A., Ryabinin, P., Ellrott, K., Sokolov, A., and Stuart, J. M., “Prophetic Granger Causality to infer gene regulatory networks”, PloS one, vol. 12, p. e0170340, 2017.

2016

S. M. Hill, Heiser, L. M., Cokelaer, T., Unger, M., Nesser, N. K., Carlin, D. E., Zhang, Y., Sokolov, A., Paull, E. O., Wong, C. K., and , “Inferring causal molecular networks: empirical assessment through a community-based effort”, Nature methods, vol. 13, p. 310, 2016.

A. Sokolov, Carlin, D. E., Paull, E. O., Baertsch, R., and Stuart, J. M., “Pathway-based genomics prediction using generalized elastic net”, PLoS computational biology, vol. 12, p. e1004790, 2016.

J. M. Drake, Paull, E. O., Graham, N. A., Lee, J. K., Smith, B. A., Stoyanova, T., Faltermeier, C. M., Carlin, D. E., Vashisht, A., Huang, J., and , “Patient-specific druggable networks in lethal prostate cancer through proteome-guided multi-omic integration”. American Association for Cancer Research, 2016.

J. M. Drake, Paull, E. O., Graham, N. A., Lee, J. K., Smith, B. A., Titz, B., Stoyanova, T., Faltermeier, C. M., Uzunangelov, V., Carlin, D. E., and , “Phosphoproteome integration reveals patient-specific networks in prostate cancer”, Cell, vol. 166, pp. 1041–1054, 2016.

2013

E. O. Paull, Carlin, D. E., Niepel, M., Sorger, P. K., Haussler, D., and Stuart, J. M., “Discovering causal pathways linking genomic events to transcriptional states using Tied Diffusion Through Interacting Events (TieDIE)”, Bioinformatics, vol. 29, pp. 2757–2764, 2013.