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Found 8 results
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Vaske, Charles J
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2013
C. K. Wong
,
Vaske, C. J.
,
Ng, S.
,
J Sanborn, Z.
,
Benz, S. C.
,
Haussler, D.
, and
Stuart, J. M.
,
“
The UCSC Interaction Browser: multidimensional data views in pathway context
”
,
Nucleic acids research
, vol. 41, pp. W218–W224, 2013.
2012
C. J. Vaske
,
Benz, S. C.
,
Stuart, J. M.
, and
Haussler, D.
,
“
Pathway recognition algorithm using data integration on genomic models (PARADIGM)
”
. 2012.
C. J. Vaske
,
Benz, S. C.
,
Stuart, J. M.
, and
Haussler, D.
,
“
Pathway recognition algorithm using data integration on genomic models (PARADIGM)
”
. 2012.
2010
C. J. Vaske
,
Benz, S. C.
,
J Sanborn, Z.
,
Earl, D.
,
Szeto, C.
,
Zhu, J.
,
Haussler, D.
, and
Stuart, J. M.
,
“
Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM
”
,
Bioinformatics
, vol. 26, pp. i237–i245, 2010.
Z. J Sanborn
,
Benz, S. C.
,
Craft, B.
,
Szeto, C.
,
Kober, K. M.
,
Meyer, L.
,
Vaske, C. J.
,
Goldman, M.
,
Smith, K. E.
,
Kuhn, R. M.
, and
,
“
The UCSC cancer genomics browser: update 2011
”
,
Nucleic acids research
, vol. 39, pp. D951–D959, 2010.
C. D. House
,
Vaske, C. J.
,
Schwartz, A. M.
,
Obias, V.
,
Frank, B.
,
Luu, T.
,
Sarvazyan, N.
,
Irby, R.
,
Strausberg, R. L.
,
Hales, T. G.
, and
,
“
Voltage-gated Na+ channel SCN5A is a key regulator of a gene transcriptional network that controls colon cancer invasion
”
,
Cancer research
, pp. 0008–5472, 2010.
2009
P. N. Kanabar
,
Vaske, C. J.
,
Yeang, C. - H.
,
Yildiz, F. H.
, and
Stuart, J. M.
,
“
Inferring disease-related pathways using a probabilistic epistasis model
”
, in
Biocomputing 2009
, 2009, pp. 480–491.
C. J. Vaske
,
House, C.
,
Luu, T.
,
Frank, B.
,
Yeang, C. - H.
,
Lee, N. H.
, and
Stuart, J. M.
,
“
A factor graph nested effects model to identify networks from genetic perturbations
”
,
PLoS computational biology
, vol. 5, p. e1000274, 2009.