Biblio

Found 231 results

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2006

C. S. Park, Gong, R., Stuart, J., and Tang, S. - J., “Molecular network and chromosomal clustering of genes involved in synaptic plasticity in the hippocampus”, Journal of Biological Chemistry, 2006.

A. Byrne, Weirauch, M., Wong, V., Koeva, M., Dixon, S., Stuart, J., and Roy, P., “A Systematic Genetic Interaction Anaysis of Signaling Pathways in C. elegans”, in Development & Evolution Meeting, 2006.

2005

C. Powell and Stuart, J., “Biological pathway prediction from multiple data sources using iterative Bayesian updating”, in Computational Systems Bioinformatics Conference, 2005. Workshops and Poster Abstracts. IEEE, 2005, pp. 159–160.

C. E. Forsberg, Prohaska, S. S., Katzman, S., Heffner, G. C., Stuart, J. M., and Weissman, I. L., “Differential Expression of Novel Potential Regulators in Hematopoietic Stem Cells”, PLoS Genet, vol. 1, p. e28, 2005.

C. E Forsberg, Prohaska, S. S., Katzman, S., Heffner, G. C., Stuart, J. M., and Weissman, I. L., “Differential expression of novel potential regulators in hematopoietic stem cells”, PLoS genetics, vol. 1, p. e28, 2005.

M. Weirauch and Stuart, J., “Discovering functional transcription factor binding from superimposed gene networks”, in Computational Systems Bioinformatics Conference, 2005. Workshops and Poster Abstracts. IEEE, 2005, pp. 178–179.

C. C. Powell and Stuart, J., “An Iterative Bayesian Updating Method for Biological Pathway Prediction”, University of California, Santa Cruz, 2005.

2003

J. M. Stuart, Segal, E., Koller, D., and Kim, S., “Discovering conserved pathways and core molecular machinery on a global scale.”, in International Worm Meeting, 2003.

A. B. Owen, Stuart, J., Mach, K., Villeneuve, A. M., and Kim, S., “A Gene Recommender Algorithm to Identify Coexpressed Genes in C. elegans”, Genome Research, vol. 13, pp. 1828-1837, 2003.

J. M. Stuart, Segal, E., Koller, D., and Kim, S. K., “A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules”, Science, vol. 302, no. 5643, 2003.

J. M. Stuart, Segal, E., Koller, D., and Kim, S. K., “Molecular Biology: A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules”, SCIENCE-NEW YORK THEN WASHINGTON-, pp. 249–254, 2003.

J. Michael Stuart, “Predicting Gene Function Using DNA Microarray Data from Multiple Organisms”, stanford university, 2003.

A. B. Owen, Stuart, J., Mach, K., Villeneuve, A. M., and Kim, S., “A gene recommender algorithm to identify coexpressed genes in C. elegans”, Genome research, vol. 13, pp. 1828–1837, 2003.

J. M. Stuart, Segal, E., Koller, D., and Kim, S. K., “A gene-coexpression network for global discovery of conserved genetic modules”, Science, vol. 302, pp. 249-55, 2003.

J. M. Stuart, Segal, E., Koller, D., and Kim, S. K., “A gene-coexpression network for global discovery of conserved genetic modules”, science, vol. 302, pp. 249–255, 2003.

2002

P. J. Roy, Stuart, J. M., Lund, J., and Kim, S. K., “Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans”, Nature, vol. 418, pp. 975–979, 2002.

P. J. Roy, Stuart, J. M., Lund, J., and Kim, S. K., “Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans”, Nature, vol. 418, p. 975, 2002.

D. E. Oliver, Rubin, D. L., Stuart, J. M., Hewett, M., Klein, T. E., and Altman, R. B., “Ontology development for a pharmacogenetics knowledge base”, in Pacific Symposium on Biocomputing, 2002.

M. Hewett, Oliver, D. E., Rubin, D. L., Easton, K. L., Stuart, J. M., Altman, R. B., and Klein, T. E., “PharmGKB: the Pharmacogenetics Knowledge Base”, Nucleic Acids Research, vol. 30, pp. 163-165, 2002.

2001

S. K. Kim, Lund, J., Kiraly, M., Duke, K., Jiang, M., Stuart, J. M., Eizinger, A., Wylie, B. N., and Davidson, G. S., “A Gene Expression Map for Caenorhabditis elegans”, Science, vol. 293, pp. 2087-2092, 2001.

T. E. Klein, Chang, J. T., Cho, M. K., Easton, K. L., Fergerson, R., t Hewet, M., Lin, Z., Liu, Y., Liu, S., Oliver, D. E., Rubin, D. L., Shafa, F., Stuart, J. M., and Altman, R. B., “Integrating genotype and phenotype information: an overview of the PharmGKB project”, Pharmacogenomics Journal, vol. 1, pp. 167-70, 2001.

D. E. Oliver, Hewett, M., Rubin, D. L., Stuart, J. M., Klein, T. E., and Altman, R. B., “Management of data, knowledge, and metadata on the semantic web: Experience with a pharmacogenetics knowledge base”. Stanford Medical Informatics Research Reports SMI-2001–0901–1, 9th September (URL: http://smiweb. stanford. edu/pubs/SMI\_Reports/SMI-2001–0901–1. pdf), 2001.

D. E. Oliver, Rubin, D. L., Stuart, J. M., Hewett, M., Klein, T. E., and Altman, R. B., “Ontology development for a pharmacogenetics knowledge base”, in Biocomputing 2002, 2001, pp. 65–76.

E. Bradley and Stuart, J. M., “Optimization and human movement”, SIAG/OPT Views-and-News, vol. 12, 2001.

S. K. Kim, Lund, J., Kiraly, M., Duke, K., Jiang, M., Stuart, J. M., Eizinger, A., Wylie, B. N., and Davidson, G. S., “A gene expression map for Caenorhabditis elegans”, Science, vol. 293, pp. 2087–2092, 2001.

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