Data Sources

Yeast

SGD

• Data File: ftp://genome-ftp.stanford.edu/pub/yeast/data_download/gene_registry/registry.genenames.tab
• Format: Locus name<\t>Other name<\t>Description<\t>Gene product<\t>Phenotype<\t>ORF name<\t>SGDID<\t>
• Grep Find: ([^\t]+)\t[^\t]*\t([^\t]+)\t[^\t]*\t[^\t]*\t[^\t]*\t([^\t]+)

SGD ID

• Grep Replace: \3\t\2

SGD Locus

• Grep Replace: \1\t\2

Human

HGNC

• Data File: http://www.gene.ucl.ac.uk/cgi-bin/nomenclature/searchgenes.pl Search for '*'
• Format: HGNC ID<\t>Approved Symbol<\t>Approved Gene Name<\t>Chromosome<\t>Accession ID<\t>Previous Symbols<\t>Aliases

This public copy of the database was last updated Tuesday June 26 06:21:25 2007 There are now 24448 approved gene symbols, 28758 aliases, and 2906 withdrawn symbols.

^([^\t]*)\t([^\t]*)\t([^\t]*)\t([^\t]*)\t([^\t]+)\t([^\t]*)\r

-- Main.gregd - 26 Jun 2007