gene tissue pr_auc precision recall BRAF_MISSENSE THCA 0.969099968530494 0.951414835164835 0.953296703296703 22Q12.1:MN1,CHEK2,ZNRF3:_DEL ACC 0.92994076764202 0.738095238095238 0.928571428571429 9P21.3:MLLT3,CDKN2A:_DEL ESCA 0.912570903103779 0.876851851851852 0.861111111111111 CCDC6_FUSION THCA 0.884475469906676 0.777777777777778 0.944444444444444 13Q14.11:FOXO1:_DEL BLCA 0.861370563888011 0.491111111111111 0.8 SETD2_TRUNCATING KIRP 0.847820324220757 0.41969696969697 0.909090909090909 9P21.3:MLLT3,CDKN2A:_DEL PAAD 0.839501745968942 0.716666666666667 0.764705882352941 ARID1A_TRUNCATING UCEC 0.83186710371338 0.753342907092907 0.835555555555556 TSC1_TRUNCATING BLCA 0.815324184553689 0.647058823529412 0.764705882352941 NSD1_TRUNCATING HNSC 0.805268414404041 0.656666666666667 0.925 BRAF_MISSENSE COAD 0.790784675199397 0.583095238095238 0.833333333333333 APC_TRUNCATING COAD 0.774690022067579 0.736126202229143 0.752272727272727 TP53_MISSENSE COAD 0.76432554714566 0.71 0.76875 CIC_TRUNCATING LGG 0.74914160470514 0.551666666666667 0.908333333333333 KIT_MISSENSE TGCT 0.728412775605626 0.538461538461538 0.769230769230769 TP53_TRUNCATING LUSC 0.689192330644297 0.535209235209235 0.945 FBXW7_MISSENSE UCS 0.67278964417831 0.648888888888889 0.8 TP53_TRUNCATING HNSC 0.650914739993266 0.531247086247086 0.855 TP53_TRUNCATING PAAD 0.605080502724399 0.454901960784314 0.774509803921569 CDH1_TRUNCATING BRCA 0.57486752382785 0.433098013098013 0.9575 gene tissue pr_auc precision recall SF3B1_MISSENSE UVM 1 1 1 RET_FUSION THCA 0.965342640972003 0.866666666666667 0.95 TP53_MISSENSE UCS 0.926678634067821 0.799206349206349 0.755555555555556 NFE2L2_MISSENSE ESCA 0.905995162701483 0.671875 0.8125 TP53_MISSENSE LGG 0.882057377451806 0.814083139083139 0.891818181818182 NF1_TRUNCATING SKCM 0.856619035665808 0.741666666666667 0.925 TP53_TRUNCATING READ 0.847261924320855 0.621428571428571 0.892857142857143 SS18_FUSION SARC 0.83721330710684 0.8 0.9 9P21.3:MLLT3,CDKN2A:_DEL LGG 0.828855933682755 0.668333333333333 0.808333333333333 NRAS_MISSENSE THCA 0.815178447806105 0.658333333333333 0.85 10Q23.31:PTEN,FAS:_DEL CESC 0.800252311151253 0.525757575757576 1 10Q23.31:PTEN,FAS:_DEL COAD 0.788431401344997 0.555555555555556 0.833333333333333 SF3B1_MISSENSE BRCA 0.769009496022862 0.509259259259259 0.777777777777778 18Q21.2:SMAD4,DCC:_DEL PAAD 0.762288232488042 0.451960784313725 0.911764705882353 TP53_MISSENSE BRCA 0.748541469830593 0.629542818292818 0.767222222222222 RPL22_TRUNCATING STAD 0.713693845851488 0.430827067669173 1 PPP2R1A_MISSENSE UCS 0.68029011970262 0.472380952380952 0.883333333333333 MSN_MISSENSE UCEC 0.669489601880001 0.587619047619048 0.8 EGFR_MISSENSE LGG 0.643170033301533 0.418333333333333 0.875 RB1_TRUNCATING BLCA 0.592846818458861 0.439761904761905 0.825 ATP2B3_MISSENSE UCEC 0.556887835368618 0.409285714285714 0.775 gene tissue pr_auc precision recall ERG_FUSION PRAD 0.995969876301763 1 0.852777777777778 TMPRSS2_FUSION PRAD 0.965225023174557 0.941224747474747 0.887777777777778 9P21.3:MLLT3,CDKN2A:_DEL LUSC 0.918365010134356 0.650138888888889 0.95 9P21.3:MLLT3,CDKN2A:_DEL BLCA 0.90340553563122 0.517786519036519 0.94 RBM10_TRUNCATING BLCA 0.873973239898192 0.621212121212121 1 BRAF_MISSENSE SKCM 0.855469014641001 0.775789627039627 0.764393939393939 BAP1_TRUNCATING LIHC 0.844380660208471 0.583333333333333 0.8 TP53_MISSENSE LUSC 0.834505027058645 0.789541014541015 0.775378787878788 PCBP1_MISSENSE COAD 0.818894447832042 0.692307692307692 0.769230769230769 ATRX_TRUNCATING LGG 0.813061090282593 0.693601398601399 0.875 9P21.3:MLLT3,CDKN2A:_DEL MESO 0.799789342414405 0.789285714285714 0.81875 PTEN_TRUNCATING UCEC 0.785313050239386 0.668241982690512 0.843560606060606 TP53_TRUNCATING ESCA 0.768883733912568 0.555555555555556 0.916666666666667 2Q37.3:ACKR3:_DEL LGG 0.755359818625902 0.637254901960784 0.941176470588235 ACVR2A_TRUNCATING STAD 0.743341251939513 0.5475 0.825 TP53_TRUNCATING OV 0.712565148651653 0.552857142857143 0.933333333333333 JAK1_TRUNCATING UCEC 0.679574997590816 0.443928571428571 0.783333333333333 TP53_TRUNCATING COAD 0.663601835914816 0.475 0.825 10Q23.31:PTEN,FAS:_DEL SKCM 0.630645790559408 0.465833333333333 0.8 PIK3CA_MISSENSE BRCA 0.585631959656793 0.518544585778863 0.751666666666667 gene tissue pr_auc precision recall IDH1_MISSENSE LGG 0.976415908391342 0.947030533106385 0.944005847953216 KRAS_MISSENSE PAAD 0.951053456667761 0.90546218487395 0.892156862745098 10Q23.31:PTEN,FAS:_DEL PRAD 0.917713810894821 0.710753968253968 0.895 9P21.3:MLLT3,CDKN2A:_DEL HNSC 0.895305859873825 0.534983884579473 0.948214285714286 SPOP_MISSENSE PRAD 0.863536035702135 0.795833333333333 0.891666666666667 13Q14.13:LCP1:_DEL BLCA 0.852790015724427 0.409722222222222 0.888888888888889 CTNNB1_MISSENSE LIHC 0.841922513328117 0.814404761904762 0.7775 TP53_TRUNCATING SKCM 0.834421754231996 0.46 0.95 9P21.3:MLLT3,CDKN2A:_DEL GBM 0.817030437201278 0.728540903540904 0.923076923076923 9P21.3:MLLT3,CDKN2A:_DEL LUAD 0.807671204500643 0.519900793650794 0.858333333333333 CTNNB1_MISSENSE UCEC 0.799729770779027 0.794107142857143 0.757142857142857 TP53_TRUNCATING BRCA 0.780915879217896 0.704007936507936 0.78 BAP1_TRUNCATING KIRC 0.766144737124943 0.5125 0.85 TP53_MISSENSE UCEC 0.752409271497838 0.645615079365079 0.771666666666667 EZH2_MISSENSE UCEC 0.740069129068666 0.599166666666667 0.825 TP53_TRUNCATING STAD 0.691847738280935 0.418869047619048 0.916666666666667 SMARCA4_TRUNCATING LUAD 0.673056915662758 0.424404761904762 1 8P23.3:ARHGEF10:_DEL OV 0.652018881252312 0.440119047619048 0.9 4Q27:IL2:_DEL PRAD 0.624540523284947 0.409090909090909 0.818181818181818 CIC_MISSENSE LGG 0.580606927303439 0.412797619047619 0.8